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The Group of Hong-Zhi Kong: Evolutionary Developmental Genetics and Regulatory Genomics

 

Members      Address      Education      Professional Experience

          Areas of Interest      Grants      Selected publications          

                                                                                                                                                                                                                                   中文

Address:

            Research Center for Systematic and Evolutionary Botany

            Institute of Botany, the Chinese Academy of Sciences

            20 Nanxincun, Xiangshan

            Beijing 100093, China

            Tel: 86-10-62836489; Fax: 86-10-62590843

            E-mail: hzkong@ibcas.ac.cn; hongzhi_kong@hotmail.com

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Education:

        2000.7    Ph. D., Botany; Institute of Botany, Chinese Academy of Sciences (CAS), China

        1995.7    B. S., Botany; Department of Biology, Northwest university, China

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Professional Experience:

        2007.07-present      Principle Investigator (PI); Research Group for Evo-Devo and Regulatory Genomics, Institute of Botany, Chinese Academy of Sciences, China

         2006.12-present       Professor; Institute of Botany, Chinese Academy of Sciences, China

         2003.10-2006.12      Associate Professor; Institute of Botany, Chinese Academy of Sciences, China

        2006.06-2008.08    Advanced Visiting Scholar; Department of Biology, Pennsylvania State University, USA (collaborator: Masatoshi Nei)

         2002.04-2004.10     Visiting Postdoctoral Scholar; Department of Biology, Pennsylvania State University, USA (advisors: Hong Ma and Claude W. dePamphilis)

          2000.08-2003.08     Assistant Professor; Institute of Botany, Chinese Academy of Sciences, China

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Areas of Interest:

      Evolutionary Developmental Genetics (Evo-Devo); Regulatory Genomics;

      Bioinformatics; Molecular Evolution and Phylogenetics; Molecular Biogeography;

      Basal Angiosperms; Basal Eudicots; Chloranthaceae; Ranunculaceae.

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Grants:

      Genetic Controls and Molecular Mechanisms for the Development and Evolution of the Flower; CAS Grant for Knowledge Innovation, 2007.01-2010.12

       Evolutionary Developmental Biology (Evo-Devo) of the Flowers in Basal Eudicots; IBCAS Grant for Scientific Frontiers, 2006.01-2008.12

       Evolution of A-, B-, C, and E-Classes of Plant MADS-box Genes from Basal Eudicots; NSFC, 2006.01-2009.12

      Functional and Evolutionary Study of Five MADS-box Genes from Chloranthus spicatus (Chloranthaceae); NSFC, 2005.01-2007.12

       Phylogeny and Molecular Biogeography of the Chloranthaceae; NSFC, 2002.01-2004.12

       Development and Evolution of the Simplest Flowers in Angiosperms; NSFC, 2002.01-2002.12

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Selected publications (* Corresponding author):

(24) Xu G., Ma H., Nei M., Kong H.*. Evolution of F-box genes in plants: different modes of sequence divergence and their relationships with functional diversification. Proceedings of the National Academy of Sciences USA (in press; *corresponding authors)

(23) Su K., Zhao S., Shan H., Kong H., Lu W., Theissen G., Chen Z., Meng Z.. 2008. The MIK region rather than the C-terminal domain of AP3-like class B floral homeotic proteins determines functional specificity in the development and evolution of petals. New Phytologist 178: 544-558 [PDF]

(22) Quan L., Xiao R., Li W., Oh S.-A., Kong H., Ambrose J. C., Malcos J. L., Cyr R., Twell D., Ma H. 2008. Functional divergence of the duplicated Arabidopsis ATK5 and ATK1 genes: critical roles in meiosis and gametophyte development. The Plant Journal 53: 1013-1026 [PDF]

(21) Zhu X.-Y., Chase M. W., Qiu Y.-L., Kong H.-Z., Dilcher D. L., Li J.-H., Chen Z.-D. 2007. Mitochondrial matR sequences help to resolve deep phylogenetic relationships in rosids. BMC Evolutionary Biology 7: 217 [PDF]

(20) Kong H.*, Landherr L. L., Frohlich M. W., Leebens-Mack J., Ma H., dePamphilis C. W.*, 2007. Patterns of gene duplication in the plant SKP1 gene family in angiosperms: evidence for multiple mechanisms of rapid gene birth. The Plant Journal 50: 873-885 (*corresponding authors) [PDF]

(19) Shan H., Zhang N., Liu C., Xu G., Zhang J., Chen Z.*, Kong H.*, 2007. Patterns of gene duplication and functional diversification during the evolution of the AP1/SQUA subfamily of plant MADS-box genes. Molecular Phylogenetics and Evolution 44: 26-41 (*corresponding authors) [PDF]

(18) Xu G., Kong H.*, 2007. Duplication and divergence of floral MADS-box genes in grasses: evidence for the generation and modification of novel regulators. Journal of Integrative Plant Biology 49 (6): 760-768 (*corresponding author) [PDF]

(17) Shan H., Su K., Lu W., Kong H., Chen Z., Meng Z. 2006. Conservation and divergence of candidate class B genes in Akebia trifoliata (Lardizabalaceae). Development Genes and Evolution 216: 785-795 [PDF]

(16) Lin Z., Kong H., Nei M., Ma H. 2006. Origins and evolution of the recA/RAD51 gene family: Evidence for ancient gene duplication and symbiotic gene transfer. Proceedings of the National Academy of Sciences USA 103: 10328-10333 [PDF]

(15) Zahn L. M.*, Kong H.*, Leebens-Mack J. H., Kim S., Soltis P. S., Landherr L. L., Soltis D. E., dePamphilis C. W., Ma H. 2005. The Evolution of the SEPALLATA subfamily of MADS-box genes: A pre-angiosperm origin with multiple duplications throughout angiosperm history. Genetics 169: 2209-2223 (*co-first authors) [PDF]

(14) Kim S., Koh J., Yoo M.-J., Kong H., Hu Y., Ma H., Soltis P. S., Soltis D. E. 2005. Expression of floral MADS-box genes in basal angiosperms: Implication for the evolution of floral regulators. The Plant Journal 43: 724-744 [PDF]

(13) Li G.-S., Meng Z., Kong H.-Z., Chen Z.-D., Theissen G., Lu A.-M. 2005. Characterization of candidate class A, B, and E floral homeotic gene from the perianthless basal angiosperm Chloranthus spicatus (Chloranthaceae). Development Genes and Evolution 215 (9): 437-449 [PDF]

(12) Soltis D. E., Albert V. A., Kim S., Yoo M.-J. , Soltis P. S., Frohlich M. W., Leebens-Mack J., Kong H., Wall K., Ma H., dePamphilis C.W. 2005. Evolution of the Flower. In Diversity and Evolution of Plants, Ed. R. Henry. CABI Publishers pp. 165-200

(11) Kong H., Leebens-Mack J., Ni W., dePamphilis C. W., Ma H. 2004. Highly heterogeneous rates of evolution in the SKP1 gene family in plants and animals: Functional and evolutionary implications. Molecular Biology and Evolution 21: 117-128 [PDF]

(10) Wang G.*, Kong H.*, Sun Y.*, Zhang X., Zhang W., Altman N., dePamphilis C. W., Ma H. 2004. Genome-wide analysis of the cyclin family in Arabidopsis and comparative phylogenetic analysis of plant cyclin-like proteins. Plant Physiology 135: 1084-1099 (*co-first authors) [PDF]

(9) Zhang F.-M., Kong H.-Z., Ge S., 2003. Allozyme variation and population differentiation of the Aconitum delavayi complex in the Hengduan Mountains of China. Biochemical Genetics 41: 47-55 [PDF]

(8) Kong H.-Z., Chen Z.-D., Lu A.-M. 2002. Phylogenetic relationships within Chloranthus Sw. (Chloranthaceae) based on nuclear ITS and plastid trnL-F sequence data. American Journal of Botany 89 (6): 940-946 [PDF]

(7) Kong H.-Z., Lu A.-M., Endress P. K. 2002. Floral organogenesis of Chloranthus sessilifolius K. F. Wu (Chloranthaceae) with special emphasis on the morphological nature of the androecium of Chloranthus Sw. Plant Systematics and Evolution 232: 181-188 [PDF]

(6) Kong H.-Z. 2001. Comparative morphology of leaf epidermis of the Chloranthaceae. Botanical Journal of the Linnean Society 136: 281-296 [PDF]

(5) Kong H.-Z. 2000. Karyotypes of Sarcandra Gardn. and Chloranthus Sw. (Chloranthaceae) from China. Botanical Journal of the Linnean Society 132: 327-342 [PDF]

(4) Kong H.-Z., Chen Z.-D. 2000. Phylogeny in Chloranthus Swartz (Chloranthaceae) inferred from sequence analysis of nrDNA ITS region. Acta Botanica Sinica 42 (7): 762-764 [PDF]

(3) Kong H.-Z. 2000. Taxonomic notes on Chloranthus henryi Hemsl. and its allies. Acta Phytotaxonomica Sinica 38 (4): 355-365 [PDF]

(2) Kong H.-Z., Liu J.-Q. 1999. Karyomorphology of the genus Pomatosace Maxim. (Primulaceae). Acta Phytotaxonomica Sinica 37 (5): 445-450 [PDF]

(1) Kong H.-Z., Yang Q.-E. 1997. Karyomorphology and relationships of the genus Circaeaster Maxim. Acta Phytotaxonomica Sinica 35 (6): 494-499 [PDF]

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State Key Laboratory of Systematic & Evolutionary Botany (LSEB)

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Address: 20 Nanxincun, Xiangshan, Beijing 100093, China

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